Expectation- maximizationalgorithm and bayesian methods were used to estimate haplotype frequencies.
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An expectation- maximizationalgorithm is described to account for unknown variance and covariance parameters.
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An expectation- maximizationalgorithm is developed for numerical calculation.
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Haplotypes were inferred with an expectation- maximizationalgorithm, and allelic interaction was analyzed by logistic regression modeling.
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We calculated time within primary infection laboratory stages using actual observed transitions and with an expectation- maximizationalgorithm.
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We selected target genes and SNPs primarily using a candidate-SNP approach and estimated haplotypes using the expectation- maximizationalgorithm.
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Here we present an expectation- maximizationalgorithm built on a pair hidden Markov model that is able to properly handle indels in neutrally evolving DNA sequences.
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Haplotypes' frequencies were estimated using the Expectation- Maximizationalgorithm.