Selenoprofiles is a computationalpipeline able to correctly annotate selenoprotein genes in genomic sequences.
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Using a specific computationalpipeline for plant microRNA identification, we identified 24 novel microRNA families.
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This paper describes the sequencing protocol and computationalpipeline for the PGV-001 personalized vaccine trial.
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To explore these issues systematically, we first developed a computationalpipeline to identify transcribed pseudogenes from RNA-Seq data.
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Functional annotation of significant results was obtained via a computationalpipeline exploiting ontology and interaction networks, and tissue-specific and gene set enrichment analyses.
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We present a data-driven computationalpipeline for the genome-wide identification of SL interactions in cancer by analyzing large volumes of cancer genomic data.
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To walk the user through the computationalpipeline, we use a recently published experiment predicting protein sub-cellular localisation in pluripotent embryonic mouse stem cells.
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We developed a computationalpipeline that carefully controls for false positives while calling RNA editing events from genome and whole-transcriptome data of the same individual.
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We describe a generic computationalpipeline for quantitative cross-linking mass spectrometry consisting of modules for quantitative data extraction and statistical assessment of the obtained results.
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A web-based interactive tool allows online figure customization, from which R code can be downloaded for integration with computationalpipelines.
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Besides the interactive web interface, g:Profiler can be accessed in computationalpipelines using our R package, Python interface and BioJS component.