Both regions demonstrate similar relative DNase I sensitivities within a given tissue.

Precise binding regions were investigated by DNAse I protection studies.

In situ oligo ligation technique was used to identify specific DNase I-type DNA cleavage.

Gel shift and DNase I analyses demonstrated that IclR binds to its own promoter.

DNA-melting and DNase I footprinting experiments were also performed.

Results of DNase I footprinting provide strong support for bent recognition helices in leucine zipper protein-DNA complexes.

The DHS map was developed by sequencing individual DNase I cleavage sites using massively parallel sequencing technologies.

The chromatin structure of the chick alpha 2(I) collagen gene was probed with DNase I.

Targeting NFATc1 with specific small hairpin RNA inhibits DNase I hypersensitive site formation and down-regulates target gene expression.

Addition of these amino acids strongly affects the extent of the region protected by CodY in DNase I footprints.

The NBS is well protected during DNase I footprinting assays and specifically binds proteins in electrophoretic mobility shift assays.

DNase I footprinting experiments indicated that the nuclease specifically binds to its cleavage sites on the DNA under non-catalytic conditions.

Here we investigated the transcriptional regulation of the gene, using DNase I hypersensitivity assay followed by luciferase reporter gene assay.

DNase I hypersensitivity and chromatin immunoprecipitation assays demonstrated that the lack of expression was correlated with a closed chromatin structure.

To assess whether 3D chromatin organization changes during this transition, we established Capture Hi-C with target-sequence enrichment of DNase I hypersensitive sites.

ENCODE also generated the genome-wide mapping of eleven histone marks, one histone variant, and DNase I hypersensitivity sites in seven cell lines.